STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68025.1Acyltransferase; KEGG: efu:HMPREF0351_12432 1.6e-66 acyltransferase; Psort location: CytoplasmicMembrane, score: 10.00. (624 aa)    
Predicted Functional Partners:
KXB68026.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.598
mprF-2
Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.
 
   
 0.533
KXB68024.1
3-dehydroquinate synthase; KEGG: lrm:LRC_04080 4.4e-96 glycerol dehydrogenase; K00005 glycerol dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
       0.505
KXB68027.1
CorA-like protein; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.504
KXB68588.1
Thermonuclease family protein; KEGG: bmq:BMQ_2840 2.4e-33 thermonuclease K01174; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.406
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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