STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68046.1Trypsin; KEGG: cst:CLOST_2551 4.2e-75 2-alkenal reductase K08070; Psort location: Periplasmic, score: 9.44. (404 aa)    
Predicted Functional Partners:
KXB68239.1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.927
lon
Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.
   
 0.686
rplK
Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
 
   0.681
KXB68224.1
KEGG: tte:TTE0544 2.9e-58 CaiD; 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 9.97; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.654
KXB68042.1
KEGG: osp:Odosp_3182 6.6e-77 3-hydroxybutyryl-CoA dehydratase K01715; Psort location: Cytoplasmic, score: 9.97; Belongs to the enoyl-CoA hydratase/isomerase family.
    
  0.654
KXB67338.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
    
 
 0.654
KXB66843.1
KEGG: apr:Apre_0544 4.1e-84 short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase; Psort location: Cytoplasmic, score: 9.26; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.649
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 
 0.642
KXB65305.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
  
 0.636
secA
Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.
    
 0.635
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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