STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68051.1Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18. (147 aa)    
Predicted Functional Partners:
KXB68050.1
Universal bacterial protein YeaZ; KEGG: amt:Amet_0804 1.3e-32 peptidase M22, glycoprotease; K14742 hypothetical protease; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.972
KXB68049.1
Hydrolase, P-loop family; KEGG: efc:EFAU004_00653 1.6e-18 ATPase K06925; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.872
KXB67064.1
KEGG: apb:SAR116_1706 1.6e-11 DNA-binding protein; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.810
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
 
  
 0.801
aroK
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
    
  0.775
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
    
  0.769
KXB68563.1
Cupin domain protein; KEGG: cnc:CNE_2c19670 1.3e-14 amaB1; N-carbamoyl-L-amino acid hydrolase AmaB; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.738
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
 
   
 0.556
KXB68048.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.546
KXB68183.1
Acetyltransferase, GNAT family; KEGG: bmd:BMD_3701 1.1e-12 spermidine N1-acetyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 0.502
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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