STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68084.1Dihydroorotase family protein; KEGG: csh:Closa_4136 2.8e-53 dihydroorotase, multifunctional complex type; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97. (280 aa)    
Predicted Functional Partners:
pyrB
KEGG: ere:EUBREC_2349 2.4e-79 pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit; Psort location: Cytoplasmic, score: 9.97; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.993
pyrD
Dihydroorotate dehydrogenase 1B; Catalyzes the conversion of dihydroorotate to orotate.
 
 0.974
KXB68439.1
Oxidoreductase, FAD-binding protein; KEGG: awo:Awo_c16190 5.4e-43 pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK K02823; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.959
KXB67014.1
Oxidoreductase NAD-binding domain protein; KEGG: cbb:CLD_1218 1.4e-92 ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.923
KXB67015.1
Glutamate synthase; KEGG: cbt:CLH_2956 6.8e-162 gltA; putative oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.912
pyrR
Pyrimidine operon regulatory protein/uracil phosphoribosyltransferase PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.
 
 
 0.901
pyrE
Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
 
 
 0.858
carB
KEGG: cbl:CLK_1227 0. carB; carbamoyl phosphate synthase large subunit K01955; Psort location: Cytoplasmic, score: 9.97; Belongs to the CarB family.
 
 
 0.846
KXB68437.1
KEGG: cbm:CBF_1820 5.4e-66 carA; carbamoyl-phosphate synthase small subunit K01956; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.834
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
    
  0.810
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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