STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB68085.1KEGG: fma:FMG_1504 3.2e-61 L-serine dehydratase subunit beta; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.97; Belongs to the iron-sulfur dependent L-serine dehydratase family. (231 aa)    
Predicted Functional Partners:
KXB68086.1
KEGG: faa:HMPREF0389_01609 1.1e-72 L-serine dehydratase, iron-sulfur-dependent subunit alpha; K01752 L-serine dehydratase; Psort location: Cytoplasmic, score: 9.26.
 
 0.999
glyA
Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
  
 
 0.903
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
  
 
 0.855
KXB67409.1
KEGG: efa:EF1140 5.7e-39 gloA; lactoylglutathione lyase; K01759 lactoylglutathione lyase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.792
KXB68201.1
KEGG: cle:Clole_1610 9.7e-60 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.785
KXB68020.1
KEGG: ate:Athe_2254 1.0e-48 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
     
 0.779
KXB68084.1
Dihydroorotase family protein; KEGG: csh:Closa_4136 2.8e-53 dihydroorotase, multifunctional complex type; K01465 dihydroorotase; Psort location: Cytoplasmic, score: 9.97.
       0.549
serC
Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
  
 
 0.539
KXB68087.1
UBA/TS-N domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.506
KXB68276.1
HAD hydrolase, family IB; KEGG: cbj:H04402_02837 8.4e-22 phosphoserine phosphatase.
   
 
 0.500
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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