STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67745.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (256 aa)    
Predicted Functional Partners:
KXB67743.1
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 4.7e-12 ytrA; histidine utilization repressor.
       0.773
KXB67744.1
KEGG: sgg:SGGBAA2069_c09610 3.7e-51 ABC transporter ATP-binding protein K01990; Psort location: Cytoplasmic, score: 9.12.
       0.773
KXB67741.1
Putative bacitracin ABC transporter, ATP-binding protein BcrA; KEGG: bya:BANAU_0413 2.2e-37 ydbJ1; spermidine/putrescine import ATP-binding protein potA K09687; Psort location: CytoplasmicMembrane, score: 7.88.
       0.697
KXB67742.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.697
KXB67739.1
Flavodoxin; KEGG: tpl:TPCCA_0925 8.4e-22 nitrogenase (flavodoxin); Psort location: Cytoplasmic, score: 8.96.
       0.432
KXB67740.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.432
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.