STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67660.1KEGG: efu:HMPREF0351_12646 2.3e-58 bcrA; bacitracin ABC superfamily ATP binding cassette transporter, ABC protein K09687; Psort location: CytoplasmicMembrane, score: 7.88. (322 aa)    
Predicted Functional Partners:
KXB67659.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.904
KXB65155.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.594
KXB68572.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.552
KXB66853.1
Putative mutacin ABC transporter protein, MutE; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
  0.491
KXB66852.1
Lantibiotic protection ABC transporter permease subunit, MutG family; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.458
KXB67243.1
KEGG: oih:OB0359 2.5e-38 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
  0.445
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
   0.427
atpD-2
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
   0.426
atpA-2
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
    
   0.424
KXB66272.1
KEGG: bbp:BBPR_1133 8.2e-47 ABC transporter ATP-binding protein K01990; Psort location: Cytoplasmic, score: 9.12.
  
 
 
0.412
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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