STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67275.1Tetratricopeptide repeat protein; Psort location: Cytoplasmic, score: 8.96. (408 aa)    
Predicted Functional Partners:
KXB67276.1
VanZ-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.559
KXB67277.1
HAD hydrolase, family IA, variant 3; KEGG: eel:EUBELI_20367 3.7e-22 thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase; Psort location: Cytoplasmic, score: 9.97.
       0.559
KXB67278.1
KEGG: lcb:LCABL_21450 1.2e-43 dppA; D-aminopeptidase K02035; Psort location: Cytoplasmic, score: 8.96.
       0.514
engB
Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
   
    0.487
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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