STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67276.1VanZ-like protein; Psort location: CytoplasmicMembrane, score: 10.00. (187 aa)    
Predicted Functional Partners:
KXB67277.1
HAD hydrolase, family IA, variant 3; KEGG: eel:EUBELI_20367 3.7e-22 thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase; Psort location: Cytoplasmic, score: 9.97.
       0.779
KXB67278.1
KEGG: lcb:LCABL_21450 1.2e-43 dppA; D-aminopeptidase K02035; Psort location: Cytoplasmic, score: 8.96.
       0.705
KXB67275.1
Tetratricopeptide repeat protein; Psort location: Cytoplasmic, score: 8.96.
       0.559
tadA
Cytidine and deoxycytidylate deaminase zinc-binding region; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
       0.506
KXB65324.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
     0.401
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.