STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67280.1Hypothetical protein; KEGG: rcu:RCOM_1980690 2.8e-07 Phenylacetic acid degradation protein paaY, putative. (143 aa)    
Predicted Functional Partners:
KXB67293.1
KEGG: dca:Desca_2638 3.2e-116 UDP-N-acetylglucosamine 2-epimerase K01791; Psort location: Cytoplasmic, score: 9.97.
    
  0.666
KXB67281.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.545
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.456
KXB68020.1
KEGG: ate:Athe_2254 1.0e-48 serine O-acetyltransferase K00640; Psort location: Cytoplasmic, score: 9.97.
    
 0.413
KXB67292.1
Glycosyltransferase, group 4 family; KEGG: tmt:Tmath_0189 3.6e-85 glycosyl transferase; K13685 UDP-N-acetylglucosamine:undecaprenyl-P N-acetylglucosaminyl 1-P transferase; Psort location: CytoplasmicMembrane, score: 10.00.
  
    0.406
KXB67282.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.404
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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