STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67284.1Cation transport protein; KEGG: ssr:SALIVB_0283 8.2e-79 DNA polymerase IV K03498; Psort location: CytoplasmicMembrane, score: 10.00. (484 aa)    
Predicted Functional Partners:
KXB67283.1
Putative potassium transporter peripheral membrane component; KEGG: scp:HMPREF0833_11023 5.4e-66 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: CytoplasmicMembrane, score: 7.88.
 
 
 0.988
KXB67285.1
TrkA protein; KEGG: scp:HMPREF0833_11023 0.00018 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.988
KXB68174.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.9e-77 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.854
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.761
KXB66597.1
TrkA protein; KEGG: suq:HMPREF0772_12145 1.3e-34 ktrA; Trk family potassium (K+) transporter, NAD+ binding protein K03499; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.759
KXB65332.1
TrkA protein; KEGG: mpa:MAP3299c 1.0e-11 hypothetical protein; K03426 NAD+ diphosphatase; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.759
KXB67287.1
Hypothetical protein; KEGG: cro:ROD_32441 4.8e-09 esterase K06889.
       0.758
KXB67282.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.741
KXB67288.1
Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
       0.589
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
   
   0.535
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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