STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67313.1Transcriptional regulator, TetR family; KEGG: dat:HRM2_17590 2.0e-06 ABC-type molybdate/tungstate transporter ATP binding protein (ATPase); Psort location: Cytoplasmic, score: 8.96. (216 aa)    
Predicted Functional Partners:
KXB66861.1
KEGG: efu:HMPREF0351_12109 6.9e-05 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
     0.671
KXB67316.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.666
KXB67317.1
Cobalt transport protein; KEGG: bya:BANAU_0146 2.1e-05 ybaF; putative ABC transporter ATP-binding protein K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.660
KXB67314.1
KEGG: snc:HMPREF0837_11105 9.2e-174 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.641
KXB67315.1
KEGG: snc:HMPREF0837_11106 3.6e-172 ABC transporter ATP-binding protein K06147; Psort location: CytoplasmicMembrane, score: 10.00.
       0.590
KXB67318.1
KEGG: ssr:SALIVB_0972 1.2e-123 putative ABC transporter ATP-binding protein SMU_1934c K02006; Psort location: CytoplasmicMembrane, score: 9.99.
       0.586
KXB67312.1
Hypothetical protein; KEGG: pjd:Pjdr2_3195 1.1e-18 hyaluronate lyase.
       0.568
KXB66857.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.408
KXB67321.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.3e-122 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.403
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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