STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67347.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tep:TepRe1_2605 1.7e-103 multi-sensor signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 7.88. (601 aa)    
Predicted Functional Partners:
KXB67346.1
Transcriptional regulatory protein WalR; KEGG: bbp:BBPR_1604 3.1e-47 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  0.991
KXB67349.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.914
KXB67348.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.885
KXB65162.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: bbp:BBPR_1604 5.2e-45 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  0.850
KXB65209.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: bbp:BBPR_1604 3.3e-43 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
  0.845
KXB68375.1
Response regulator receiver domain protein; KEGG: ava:Ava_1878 2.8e-37 two component transcriptional regulator K11329; Psort location: Cytoplasmic, score: 9.97.
  0.844
KXB65207.1
Putative transcriptional regulatory protein ResD; KEGG: eci:UTI89_C0420 1.6e-43 phoB; transcriptional regulator PhoB K07657; Psort location: Cytoplasmic, score: 9.97.
  0.838
KXB66895.1
Putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP; KEGG: fal:FRAAL1628 2.4e-40 response regulator in two-component regulatory system K05971; Psort location: Cytoplasmic, score: 9.97.
  0.812
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.775
KXB66275.1
KEGG: bbp:BBPR_1604 1.8e-26 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
 
  0.750
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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