Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KXB67350.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (66 aa)    
Predicted Functional Partners:
KXB67346.1
Transcriptional regulatory protein WalR; KEGG: bbp:BBPR_1604 3.1e-47 two-component response regulator K07776; Psort location: Cytoplasmic, score: 9.97.
       0.746
KXB67347.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: tep:TepRe1_2605 1.7e-103 multi-sensor signal transduction histidine kinase; K07652 two-component system, OmpR family, sensor histidine kinase VicK; Psort location: CytoplasmicMembrane, score: 7.88.
       0.746
KXB67348.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.746
KXB67349.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.746
KXB67345.1
Chorismate mutase; KEGG: lgv:LCGL_1908 1.1e-10 chorismate mutase; K04516 chorismate mutase; Psort location: Cytoplasmic, score: 8.96.
       0.579
KXB67344.1
alpha-L-glutamate ligase, RimK family; KEGG: noc:Noc_1549 4.3e-25 S6 modification enzyme RimK K05844; Psort location: Cytoplasmic, score: 9.97; Belongs to the RimK family.
       0.438
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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