STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67358.1Hypothetical protein. (137 aa)    
Predicted Functional Partners:
KXB67359.1
DNA-binding helix-turn-helix protein; KEGG: mmo:MMOB3450 1.5e-05 dam; adenine-specific DNA methyltransferase K06223.
       0.809
KXB67360.1
RDD family protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.522
KXB67361.1
Signal peptide peptidase SppA; KEGG: lwe:lwe1598 6.6e-77 protease/peptidase; K04773 protease IV; Psort location: CytoplasmicMembrane, score: 9.82.
       0.522
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.