STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67362.1Hypothetical protein. (187 aa)    
Predicted Functional Partners:
KXB67363.1
Hypothetical protein; KEGG: apb:SAR116_1911 4.8e-58 hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
KXB67364.1
Cation diffusion facilitator family transporter; KEGG: msi:Msm_0789 7.7e-35 cation efflux system protein (zinc/cadmium/cobalt); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.636
KXB67365.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.636
KXB67366.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_0646 6.0e-138 xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 9.99.
       0.583
KXB67360.1
RDD family protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.546
KXB67361.1
Signal peptide peptidase SppA; KEGG: lwe:lwe1598 6.6e-77 protease/peptidase; K04773 protease IV; Psort location: CytoplasmicMembrane, score: 9.82.
       0.546
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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