STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67389.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (279 aa)    
Predicted Functional Partners:
KXB67388.1
4Fe-4S binding domain protein; KEGG: amt:Amet_4306 6.1e-19 4Fe-4S ferredoxin; K00176 2-oxoglutarate ferredoxin oxidoreductase subunit delta.
 
     0.946
KXB67385.1
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit; KEGG: cst:CLOST_0493 2.2e-46 subunit of oxidoreductase K00177.
 
     0.937
KXB67386.1
Thiamine pyrophosphate enzyme, TPP binding domain protein; KEGG: cst:CLOST_0492 4.2e-98 subunit of oxidoreductase; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Psort location: Cytoplasmic, score: 8.96.
 
     0.929
KXB67387.1
3-methyl-2-oxobutanoate dehydrogenase; KEGG: amt:Amet_4305 1.1e-115 2-ketoisovalerate ferredoxin reductase K00174; Psort location: Cytoplasmic, score: 8.96.
 
     0.928
KXB67384.1
Rubrerythrin.
 
     0.800
KXB64928.1
DNA (cytosine-5-)-methyltransferase; KEGG: efc:EFAU004_01625 4.8e-97 adenine methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.735
KXB68592.1
Putative stage 0 sporulation protein J; KEGG: pub:SAR11_0354 3.1e-38 parB; chromosome partitioning protein K03497; Psort location: Cytoplasmic, score: 9.97; Belongs to the ParB family.
  
   0.614
KXB67150.1
ParB-like protein; KEGG: hhe:HH0423 0.0013 parB; transcriptional regulator involved in chromosome partitioning ParB K03497; Psort location: Cytoplasmic, score: 8.96.
  
   0.614
KXB65592.1
Hypothetical protein; KEGG: pha:PSHAa0816 0.00074 partitioning protein A K03496.
  
   0.614
KXB65593.1
Hypothetical protein.
  
   0.614
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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