STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67155.1Protein, SNF2 family; KEGG: ase:ACPL_5928 5.2e-167 F-box DNA helicase protein 1; Psort location: CytoplasmicMembrane, score: 7.63. (2850 aa)    
Predicted Functional Partners:
KXB67163.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.891
KXB67165.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.882
KXB67164.1
Hypothetical protein.
 
     0.865
KXB67186.1
Hypothetical protein.
 
   
 0.837
KXB67188.1
TraG/TraD family protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
    0.813
KXB65268.1
KEGG: efc:EFAU004_00298 3.4e-17 Relaxase/mobilization nuclease domain protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.792
KXB67159.1
Hypothetical protein; KEGG: pfd:PFDG_04257 9.9e-06 hypothetical protein; K01669 deoxyribodipyrimidine photo-lyase.
 
     0.790
KXB67154.1
Hypothetical protein; KEGG: lan:Lacal_0616 0.0038 acetolactate synthase small subunit; K01653 acetolactate synthase I/III small subunit; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB65592.1
Hypothetical protein; KEGG: pha:PSHAa0816 0.00074 partitioning protein A K03496.
 
    0.760
KXB65591.1
Hypothetical protein.
 
    0.757
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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