STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67158.1KEGG: rho:RHOM_15375 9.1e-135 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97. (672 aa)    
Predicted Functional Partners:
KXB67163.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.897
KXB67165.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.869
KXB67164.1
Hypothetical protein.
 
    0.830
KXB67159.1
Hypothetical protein; KEGG: pfd:PFDG_04257 9.9e-06 hypothetical protein; K01669 deoxyribodipyrimidine photo-lyase.
 
     0.819
KXB67160.1
Hypothetical protein; KEGG: dan:Dana_GF13333 7.9e-09 GF13333 gene product from transcript GF13333-RA; K00907 myosin-light-chain kinase; Psort location: Cytoplasmic, score: 8.96.
 
     0.810
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
   0.810
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
  
   0.810
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
  
 0.787
KXB65067.1
RecF/RecN/SMC protein; KEGG: bce:BC1852 1.6e-34 exonuclease SbcC K03546; Psort location: Cytoplasmic, score: 8.96.
  
 0.779
recA
RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
  
 0.769
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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