STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67162.1NlpC/P60 family protein; KEGG: cya:CYA_1627 6.9e-26 M23B family peptidase. (1314 aa)    
Predicted Functional Partners:
KXB67163.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.802
KXB67164.1
Hypothetical protein.
 
     0.793
KXB67159.1
Hypothetical protein; KEGG: pfd:PFDG_04257 9.9e-06 hypothetical protein; K01669 deoxyribodipyrimidine photo-lyase.
       0.764
KXB67160.1
Hypothetical protein; KEGG: dan:Dana_GF13333 7.9e-09 GF13333 gene product from transcript GF13333-RA; K00907 myosin-light-chain kinase; Psort location: Cytoplasmic, score: 8.96.
       0.764
KXB67165.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.764
KXB67161.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.762
KXB67158.1
KEGG: rho:RHOM_15375 9.1e-135 DNA topoisomerase III; K03169 DNA topoisomerase III; Psort location: Cytoplasmic, score: 9.97.
       0.756
KXB67157.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.717
KXB67156.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.661
KXB68396.1
Transglycosylase; KEGG: cst:CLOST_1328 1.0e-167 penicillin-binding protein, 1a family; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82.
  
     0.594
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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