STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67201.1Site-specific recombinase, phage integrase family; KEGG: bqy:MUS_1239 1.2e-24 ATP synthase C chain (lipid-binding protein)(dicyclohexylcarbodiimide-binding protein); Psort location: Cytoplasmic, score: 8.96; Belongs to the 'phage' integrase family. (390 aa)    
Predicted Functional Partners:
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.772
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
  0.772
KXB66672.1
Site-specific recombinase, phage integrase family; KEGG: bsr:I33_1800 2.0e-16 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.97.
  
    0.617
KXB67200.1
Putative repressor LexA; KEGG: gth:Geoth_0743 1.4e-26 phage repressor like XRE family transcriptional regulator; K01356 repressor LexA; Psort location: Cytoplasmic, score: 9.97; Belongs to the peptidase S24 family.
 
  
 0.563
KXB65063.1
Phage integrase, SAM-like domain protein; KEGG: bsr:I33_1800 3.1e-31 xerC; ATP-dependent protease HslV K03733; Psort location: Cytoplasmic, score: 9.97; Belongs to the 'phage' integrase family.
  
    0.513
whiA
Hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.511
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]
  
  
 0.483
KXB68382.1
Hypothetical protein; KEGG: pva:Pvag_2959 6.0e-14 yhgH; amidophosphoribosyltransferase; Psort location: Cytoplasmic, score: 8.96.
   
    0.451
purD
KEGG: faa:HMPREF0389_00494 0. phosphoribosylformylglycinamidine synthase; K01952 phosphoribosylformylglycinamidine synthase; Psort location: Cytoplasmic, score: 9.97; Belongs to the GARS family.
     
 0.434
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.430
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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