STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67018.1Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 1.2e-09 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00. (408 aa)    
Predicted Functional Partners:
KXB67017.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.884
KXB67081.1
Thymidine kinase; KEGG: fma:FMG_0715 7.4e-46 thymidine kinase; K00857 thymidine kinase; Psort location: Cytoplasmic, score: 9.97.
    
  0.554
KXB67016.1
Tetratricopeptide repeat protein; KEGG: msu:MS2199 2.5e-09 slpA; SlpA protein; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; Psort location: Cytoplasmic, score: 8.96.
       0.551
KXB68261.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
    
  0.507
KXB68252.1
Transporter, major facilitator family protein; KEGG: ssr:SALIVB_1450 0.0017 coaE; Dephospho-CoA kinase; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.432
KXB65614.1
KEGG: aoe:Clos_0920 9.9e-106 5'-nucleotidase domain-containing protein; K01081 5'-nucleotidase; Psort location: Periplasmic, score: 9.76; Belongs to the 5'-nucleotidase family.
    
  0.428
KXB67369.1
Hypothetical protein; KEGG: ppo:PPM_2151 3.3e-16 xynX5; exoglucanase xynX Exocellobiohydrolase; 1,4-beta-cellobiohydrolase; Flags: Precursor; Psort location: OuterMembrane, score: 9.52.
    
  0.426
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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