STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67021.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (97 aa)    
Predicted Functional Partners:
KXB67022.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.773
KXB67023.1
Hypothetical protein; KEGG: hwa:HQ2252A 0.0016 cadA; cadmium-transporting ATPase K01534; Psort location: CytoplasmicMembrane, score: 10.00.
       0.675
KXB67024.1
KEGG: bya:BANAU_3868 7.4e-14 desR; Chemotaxis response regulator protein-glutamate methylesterase K07693; Psort location: Cytoplasmic, score: 9.97.
       0.518
KXB67025.1
Hypothetical protein; KEGG: bcz:BCZK2894 3.1e-20 salK; sensor histidine kinase K14988; Psort location: CytoplasmicMembrane, score: 10.00.
       0.518
KXB67020.1
Repeat protein; KEGG: fma:FMG_0035 0.0040 cell wall-associated serine proteinase; K01361 lactocepin; Psort location: Periplasmic, score: 8.56.
       0.482
KXB67019.1
Hypothetical protein; KEGG: tit:Thit_1727 8.3e-08 Pectate disaccharide-lyase; Psort location: Periplasmic, score: 9.83.
       0.419
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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