STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67031.1KEGG: apb:SAR116_0013 1.1e-10 BadM/Rrf2 family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96. (137 aa)    
Predicted Functional Partners:
KXB67032.1
Hypothetical protein; KEGG: bpu:BPUM_1429 3.2e-84 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 8.96.
       0.691
KXB68269.1
KEGG: clc:Calla_1127 5.7e-78 cysteine desulfurase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.644
KXB67124.1
Putative cysteine desulfurase; KEGG: tsh:Tsac_1554 7.3e-78 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.644
KXB68579.1
SUF system FeS assembly protein, NifU family; KEGG: hbo:Hbor_34450 2.2e-05 cysteine desulfurase; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.536
ileS
isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.
       0.489
KXB67029.1
KEGG: afl:Aflv_1342 4.1e-29 phosphoglycerate mutase; K15634 probable phosphoglycerate mutase; Psort location: Cytoplasmic, score: 8.96.
  
    0.484
KXB67028.1
KEGG: cst:CLOST_1978 7.0e-73 D-cysteine desulfhydrase K05396; Psort location: Cytoplasmic, score: 9.97.
       0.482
KXB67033.1
Peptidase M16 inactive domain protein; KEGG: cbh:CLC_3253 1.0e-160 peptidase K06972; Psort location: Cytoplasmic, score: 8.96.
       0.478
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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