STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67082.1ABC transporter, ATP-binding protein; KEGG: sbu:SpiBuddy_1198 4.3e-50 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12. (238 aa)    
Predicted Functional Partners:
KXB67083.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.934
KXB65887.1
Hypothetical protein; KEGG: dpp:DICPUDRAFT_29220 0.0040 hypothetical protein; K00902 dolichol kinase; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.733
KXB67248.1
KEGG: oih:OB0359 1.3e-71 ABC transporter ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
  
 
0.605
KXB67659.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.594
KXB65155.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.594
KXB68572.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.553
KXB67080.1
Kinase, PfkB family; KEGG: ova:OBV_10270 3.1e-38 pscK; pseudouridine kinase.
  
  
 0.534
KXB67081.1
Thymidine kinase; KEGG: fma:FMG_0715 7.4e-46 thymidine kinase; K00857 thymidine kinase; Psort location: Cytoplasmic, score: 9.97.
  
    0.519
psuG
Indigoidine synthase A-like protein; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.
       0.518
KXB65549.1
KEGG: clo:HMPREF0868_1038 5.3e-91 artM; arginine ABC transporter ATP-binding protein ArtM; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
   
 
0.459
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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