STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67106.1Transcriptional regulator, AraC family; KEGG: bca:BCE_3772 9.9e-08 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase; K13530 AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase; Psort location: Cytoplasmic, score: 8.96. (318 aa)    
Predicted Functional Partners:
KXB67108.1
Cobalt transport protein; KEGG: sgg:SGGBAA2069_c22910 1.9e-08 cbiQ; cobalt import ATP-binding/permease K02008; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.942
KXB67109.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.933
KXB67107.1
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_1191 1.3e-85 Monosaccharide-transporting ATPase K02006.
 
     0.925
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
     
 0.868
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
     
 0.868
KXB67105.1
ABC transporter, ATP-binding protein; KEGG: ssg:Selsp_1600 4.7e-115 Xenobiotic-transporting ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.867
KXB67104.1
ABC transporter, ATP-binding protein; KEGG: cbi:CLJ_B1644 3.6e-124 putative multidrug export ATP-binding/permease K06147; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.865
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.769
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.697
KXB67110.1
Hypothetical protein.
       0.533
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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