STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67114.1Bidirectional hydrogenase complex protein HoxE domain protein; KEGG: sfc:Spiaf_2405 0.00034 NADH:ubiquinone oxidoreductase 24 kD subunit; K00334 NADH-quinone oxidoreductase subunit E; Psort location: Cytoplasmic, score: 8.96. (86 aa)    
Predicted Functional Partners:
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.999
KXB67299.1
Hypothetical protein; KEGG: rcu:RCOM_1911510 3.4e-18 Bile acid 7-alpha dehydratase, putative; Psort location: Cytoplasmic, score: 8.96.
   
 0.985
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.985
KXB67113.1
4Fe-4S binding domain protein; KEGG: hpk:Hprae_1780 4.0e-125 ferredoxin hydrogenase.
  
 0.982
KXB66391.1
4Fe-4S binding domain protein; KEGG: pya:PYCH_10970 2.8e-08 Coenzyme F420 hydrogenase subunit gamma; K00443 coenzyme F420 hydrogenase gamma subunit; Psort location: Cytoplasmic, score: 8.96.
   
 0.939
KXB68402.1
4Fe-4S binding domain protein; KEGG: hor:Hore_20730 4.1e-06 pyruvate ferredoxin oxidoreductase subunit delta K00171; Psort location: Cytoplasmic, score: 8.96.
   
 0.933
KXB65954.1
Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
     
 0.902
KXB66665.1
Hypothetical protein; KEGG: efc:EFAU004_02216 1.7e-30 alpha/beta hydrolase family protein.
   
   0.899
KXB65951.1
Hydrolase, alpha/beta domain protein; KEGG: bmq:BMQ_2511 2.1e-25 alpha/beta fold family hydrolase; Psort location: Cytoplasmic, score: 9.26.
   
   0.899
atpG
ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
   
 
 0.841
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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