STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB67121.1Hypothetical protein; KEGG: lbc:LACBIDRAFT_315835 4.7e-05 hypothetical protein; K02830 cell cycle checkpoint protein; Psort location: CytoplasmicMembrane, score: 9.50. (266 aa)    
Predicted Functional Partners:
KXB67122.1
LemA family protein.
 
    0.959
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
       0.811
KXB67124.1
Putative cysteine desulfurase; KEGG: tsh:Tsac_1554 7.3e-78 class V aminotransferase; K04487 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97.
       0.811
KXB65616.1
Hypothetical protein; KEGG: puv:PUV_07460 0.0054 priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase); Psort location: Cytoplasmic, score: 8.96.
  
  
 0.581
KXB67125.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.567
KXB67120.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.458
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.