STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66815.1EDD domain protein, DegV family; KEGG: mgf:MGF_3873 4.0e-22 DegV-like protein; Psort location: Cytoplasmic, score: 8.96. (279 aa)    
Predicted Functional Partners:
KXB65102.1
DAK2 domain fusion protein YloV; KEGG: bmd:BMD_4216 6.3e-120 putative phosphatase K07030; Psort location: Cytoplasmic, score: 8.96.
   0.993
KXB66816.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.784
KXB65103.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
    0.541
KXB66814.1
BioY family protein; KEGG: lml:lmo4a_0615 4.0e-15 BioY family protein K03523; Psort location: CytoplasmicMembrane, score: 10.00.
       0.468
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
       0.461
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.