STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66827.1Transcriptional regulator, IclR family protein; KEGG: cnc:CNE_2c18180 2.7e-16 4-hydroxyphenylpyruvate dioxygenase K02624. (254 aa)    
Predicted Functional Partners:
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
  0.870
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
  0.870
KXB65373.1
Transcriptional regulator, GntR family; KEGG: cnc:CNE_2c19120 1.9e-15 phnA2; phosphonoacetate hydrolase PhnA; Psort location: Cytoplasmic, score: 9.97.
  
    0.606
KXB68217.1
KEGG: apb:SAR116_0310 4.3e-07 GntR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
    0.544
KXB66826.1
ErfK/YbiS/YcfS/YnhG; KEGG: paw:PAZ_c23670 0.00048 putative L,D-transpeptidase.
       0.528
KXB68041.1
KEGG: apr:Apre_1351 1.1e-152 acetyl-CoA acetyltransferase; K00626 acetyl-CoA C-acetyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.526
KXB67080.1
Kinase, PfkB family; KEGG: ova:OBV_10270 3.1e-38 pscK; pseudouridine kinase.
  
  
 0.492
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.457
KXB65964.1
KEGG: apr:Apre_1100 1.1e-131 citrate synthase K01647; Psort location: Cytoplasmic, score: 9.97.
    
  0.446
KXB67740.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     
 0.435
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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