STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66829.1Putative branched-chain amino acid transport protein AzlD; KEGG: sil:SPOA0031 0.0088 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349; Psort location: CytoplasmicMembrane, score: 10.00. (109 aa)    
Predicted Functional Partners:
KXB66830.1
Putative azaleucine resistance protein AzlC; KEGG: apb:SAR116_0734 6.7e-08 AzlC-like protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  
 0.977
KXB66828.1
Putative permease; KEGG: btk:BT9727_0241 2.6e-89 guanine-hypoxanthine permease; xanthine/uracil permease family protein K06901; Psort location: CytoplasmicMembrane, score: 10.00.
       0.618
KXB66831.1
Hypothetical protein.
       0.564
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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