STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66590.1Prepilin-type cleavage/methylation protein. (105 aa)    
Predicted Functional Partners:
KXB66588.1
Hypothetical protein.
       0.773
KXB66589.1
Hypothetical protein.
       0.773
KXB66591.1
Prepilin-type cleavage/methylation protein.
       0.773
KXB66592.1
Hypothetical protein; KEGG: efl:EF62_0621 3.1e-09 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase family protein; Psort location: Extracellular, score: 9.64.
       0.773
KXB66586.1
Hypothetical protein; KEGG: bha:BH3793 1.1e-05 rpoE; DNA-directed RNA polymerase subunit delta K03048; Psort location: Cytoplasmic, score: 8.96.
       0.581
efp
Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.
       0.581
KXB66593.1
GDSL-like protein; KEGG: ckl:CKL_2267 4.4e-09 arylesterase; Psort location: Cytoplasmic, score: 8.96.
       0.518
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.518
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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