STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66593.1GDSL-like protein; KEGG: ckl:CKL_2267 4.4e-09 arylesterase; Psort location: Cytoplasmic, score: 8.96. (174 aa)    
Predicted Functional Partners:
KXB64939.1
Phage DNA packaging protein.
  
 0.880
KXB64947.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2143 1.4e-64 SPBc2 prophage-derived transglycosylase.
   
 
 0.794
thrS
threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).
       0.777
KXB67220.1
Hypothetical protein; KEGG: tmr:Tmar_0639 2.6e-15 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 9.97.
  
  0.614
KXB68357.1
Hypothetical protein; KEGG: smb:smi_0705 0. prtA; cell wall-associated serine proteinase.
   
  0.553
KXB68170.1
Repeat protein; KEGG: aag:AaeL_AAEL000109 1.3e-13 enolase-phosphatase e-1; K09880 enolase-phosphatase E1; Psort location: Periplasmic, score: 8.56.
   
  0.553
KXB67774.1
Hypothetical protein; KEGG: hhd:HBHAL_4444 1.1e-20 alkaline serine protease, subtilase family; Psort location: Periplasmic, score: 9.83.
   
  0.553
KXB66875.1
Hypothetical protein; KEGG: pjd:Pjdr2_3195 3.5e-24 hyaluronate lyase.
   
  0.553
KXB65303.1
Hypothetical protein; KEGG: hhd:HBHAL_4450 1.6e-16 N-acetylmuramoyl-L-alanine amidase K01448.
   
  0.553
KXB66591.1
Prepilin-type cleavage/methylation protein.
       0.523
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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