STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66665.1Hypothetical protein; KEGG: efc:EFAU004_02216 1.7e-30 alpha/beta hydrolase family protein. (250 aa)    
Predicted Functional Partners:
KXB67114.1
Bidirectional hydrogenase complex protein HoxE domain protein; KEGG: sfc:Spiaf_2405 0.00034 NADH:ubiquinone oxidoreductase 24 kD subunit; K00334 NADH-quinone oxidoreductase subunit E; Psort location: Cytoplasmic, score: 8.96.
   
   0.899
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.899
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
   0.877
KXB67299.1
Hypothetical protein; KEGG: rcu:RCOM_1911510 3.4e-18 Bile acid 7-alpha dehydratase, putative; Psort location: Cytoplasmic, score: 8.96.
  
   0.839
KXB66666.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.725
KXB66667.1
Transcriptional regulator, PadR family.
       0.725
KXB65134.1
Acyltransferase; KEGG: apr:Apre_1020 5.2e-29 phospholipid/glycerol acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 0.544
polA
DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
   0.470
KXB67309.1
KEGG: efc:EFAU004_02629 1.3e-15 phospholipase, patatin family K07001; Psort location: Extracellular, score: 8.89.
   
 
 0.462
KXB68219.1
AMP-binding enzyme; KEGG: csh:Closa_3006 2.4e-72 AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase; Psort location: Cytoplasmic, score: 9.97.
    
 0.459
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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