STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66371.1KEGG: fsu:Fisuc_1102 1.3e-41 ABC transporter; K09810 lipoprotein-releasing system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88. (227 aa)    
Predicted Functional Partners:
KXB67321.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.3e-122 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.99.
  
 0.990
KXB66370.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.939
KXB66372.1
Iron permease FTR1 family protein; KEGG: ccv:CCV52592_0433 2.2e-46 fumarate hydratase class II K01679; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.930
KXB66376.1
Efflux ABC transporter, permease protein; KEGG: har:HEAR0934 5.2e-12 macB; macrolide ABC transporter ATP-binding/membrane protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.923
KXB66375.1
Efflux ABC transporter, permease protein; KEGG: prw:PsycPRwf_1834 8.0e-11 ABC transporter-like protein; K05685 macrolide transport system ATP-binding/permease protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.907
KXB66379.1
Efflux ABC transporter, permease protein; KEGG: cha:CHAB381_1081 2.1e-08 macrolide export ATP-binding/permease protein MacB K05685; Psort location: CytoplasmicMembrane, score: 10.00.
 
  0.902
KXB67414.1
Putative oligopeptide ABC transporter, ATP-binding protein OppD; KEGG: tep:TepRe1_1901 1.5e-61 peptide ABC transporter ATPase K02031; Psort location: CytoplasmicMembrane, score: 7.88.
 
     
0.850
KXB66374.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
    0.844
KXB66373.1
Hypothetical protein; Psort location: Periplasmic, score: 9.83.
 
    0.842
KXB65562.1
Efflux ABC transporter, permease protein; KEGG: sap:Sulac_3316 7.1e-32 phosphonate-transporting ATPase K05685; Psort location: CytoplasmicMembrane, score: 10.00.
  0.810
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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