STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66393.1Cys/Met metabolism PLP-dependent enzyme; KEGG: scc:Spico_1473 1.1e-40 O-acetylhomoserine sulfhydrolase; K01740 O-acetylhomoserine (thiol)-lyase; Psort location: Cytoplasmic, score: 9.26. (131 aa)    
Predicted Functional Partners:
KXB65647.1
KEGG: csh:Closa_2452 9.0e-215 homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.881
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
     
 0.769
KXB68444.1
Methionine synthase, vitamin-B12 independent; KEGG: fma:FMG_0388 5.2e-116 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.717
KXB68019.1
KEGG: apr:Apre_0955 2.8e-78 cysteine synthase A; K01738 cysteine synthase A; Psort location: Cytoplasmic, score: 9.97; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.712
KXB68201.1
KEGG: cle:Clole_1610 9.7e-60 homoserine dehydrogenase; K00003 homoserine dehydrogenase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.591
KXB67014.1
Oxidoreductase NAD-binding domain protein; KEGG: cbb:CLD_1218 1.4e-92 ferredoxin-NADP reductase; K00528 ferredoxin--NADP+ reductase; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.577
KXB67015.1
Glutamate synthase; KEGG: cbt:CLH_2956 6.8e-162 gltA; putative oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain; Psort location: Cytoplasmic, score: 9.97.
   
 
  0.577
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
    
 0.543
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
    
 0.521
KXB65227.1
KEGG: fma:FMG_0385 0. pyruvate/ferredoxin oxidoreductase; K03737 putative pyruvate-flavodoxin oxidoreductase; Psort location: Cytoplasmic, score: 8.96.
    
 0.521
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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