STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB66272.1KEGG: bbp:BBPR_1133 8.2e-47 ABC transporter ATP-binding protein K01990; Psort location: Cytoplasmic, score: 9.12. (284 aa)    
Predicted Functional Partners:
KXB66271.1
KEGG: cbj:H04402_02191 2.1e-14 transcriptional regulator, GntR family domain / Aspartate aminotransferase; Psort location: Cytoplasmic, score: 8.96.
 
    0.925
KXB66273.1
Hypothetical protein; KEGG: mzh:Mzhil_1595 0.0055 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; K00339 NADH-quinone oxidoreductase subunit J; Psort location: CytoplasmicMembrane, score: 10.00.
       0.777
KXB65155.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.599
KXB67659.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.594
KXB67743.1
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 4.7e-12 ytrA; histidine utilization repressor.
 
    0.574
KXB65156.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_2121 3.4e-32 sulfate ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 7.88.
  
  
  0.562
KXB68572.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
  0.560
KXB66270.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.547
KXB65884.1
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 7.9e-10 ytrA; histidine utilization repressor; Psort location: Cytoplasmic, score: 8.96.
 
    0.545
KXB66269.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.536
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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