STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65982.1Cupin domain protein; KEGG: cco:CCC13826_0495 9.2e-16 5'-nucleotidase SurE. (217 aa)    
Predicted Functional Partners:
KXB67064.1
KEGG: apb:SAR116_1706 1.6e-11 DNA-binding protein; Psort location: Cytoplasmic, score: 9.97.
  
 0.776
KXB65981.1
Cyclic nucleotide-binding domain protein; KEGG: bde:BDP_1802 0.00016 Crp family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
 
    0.681
KXB65980.1
Hemerythrin HHE cation binding domain protein; KEGG: lpl:lp_2732 1.7e-07 NADPH-dependent FMN reductase family protein; K00540; Psort location: Cytoplasmic, score: 8.96.
 
     0.639
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.607
KXB65983.1
Hypothetical protein.
       0.535
KXB65987.1
Metallo-beta-lactamase domain protein; KEGG: cfu:CFU_0274 2.8e-08 mpd; organophosphate pesticide hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
     0.481
KXB65984.1
KEGG: eci:UTI89_C3072 1.8e-113 norV; anaerobic nitric oxide reductase flavorubredoxin K12264; Psort location: Cytoplasmic, score: 9.97.
 
     0.479
KXB67099.1
Hypothetical protein; KEGG: aai:AARI_05050 1.3e-08 hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
 
  0.404
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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