STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65887.1Hypothetical protein; KEGG: dpp:DICPUDRAFT_29220 0.0040 hypothetical protein; K00902 dolichol kinase; Psort location: CytoplasmicMembrane, score: 10.00. (518 aa)    
Predicted Functional Partners:
KXB65888.1
ABC transporter, ATP-binding protein; KEGG: dku:Desku_2823 6.6e-61 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
 
    0.951
KXB65889.1
KEGG: pfe:PSF113_4138 1.2e-11 TetR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97.
 
     0.859
KXB67082.1
ABC transporter, ATP-binding protein; KEGG: sbu:SpiBuddy_1198 4.3e-50 sulfate-transporting ATPase; Psort location: Cytoplasmic, score: 9.12.
 
    0.733
KXB65886.1
KEGG: mfa:Mfla_1493 0.00055 ArsR family transcriptional regulator; K03741 arsenate reductase.
       0.551
KXB65885.1
Hypothetical protein.
       0.517
KXB65884.1
Transcriptional regulator, GntR family; KEGG: ppo:PPM_0985 7.9e-10 ytrA; histidine utilization repressor; Psort location: Cytoplasmic, score: 8.96.
       0.458
KXB65598.1
Hypothetical protein.
  
    0.413
lysS
lysine--tRNA ligase; KEGG: faa:HMPREF0389_00147 8.0e-175 lysine--tRNA ligase; K04567 lysyl-tRNA synthetase, class II; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.407
KXB65597.1
Transcriptional regulator, effector binding domain protein; Psort location: Cytoplasmic, score: 9.97.
  
    0.403
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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