STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65774.1Hypothetical protein; KEGG: edi:EDI_201830 8.2e-10 GRIP domain-containing protein RUD3; Psort location: Cytoplasmic, score: 8.96. (185 aa)    
Predicted Functional Partners:
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.833
pheT
KEGG: amt:Amet_1640 2.9e-177 pheT; phenylalanyl-tRNA synthetase subunit beta K01890; Psort location: Cytoplasmic, score: 9.97.
       0.810
KXB65773.1
Peptidase, U32 family; KEGG: aar:Acear_1242 1.4e-108 peptidase U32; K08303 putative protease; Psort location: Cytoplasmic, score: 8.96.
       0.808
pheS
KEGG: fma:FMG_0868 3.2e-116 phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain; Psort location: Cytoplasmic, score: 10.00.
       0.795
mutS2
MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.
       0.790
argS
arginine--tRNA ligase; KEGG: hor:Hore_08210 6.3e-175 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 9.97.
       0.789
sepF
Putative cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
    
 
 0.573
KXB65769.1
KEGG: cyb:CYB_1515 0.00024 TPR repeat-containing protein kinase; K08884 serine/threonine protein kinase, bacterial; Psort location: Cytoplasmic, score: 8.96.
  
    0.542
KXB65770.1
KEGG: cpe:CPE1645 1.6e-75 radical SAM domain protein; K04034 anaerobic magnesium-protoporphyrin IX monomethyl ester cyclase; Psort location: Cytoplasmic, score: 8.96.
       0.536
KXB65777.1
Putative ATP synthase F0, A subunit; KEGG: cro:ROD_41951 9.4e-05 rfaL; lipid A-core:O-antigen ligase; K02847 O-antigen ligase; Psort location: CytoplasmicMembrane, score: 10.00.
       0.401
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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