STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65559.1Hypothetical protein; KEGG: sat:SYN_00474 2.1e-48 phosphoribosylaminoimidazole carboxylase NCAIR mutase subunit K06898; Psort location: Cytoplasmic, score: 8.96. (224 aa)    
Predicted Functional Partners:
KXB67303.1
TIGR00268 family protein; KEGG: sat:SYN_00475 8.2e-47 GMP synthase K01951; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.924
larC
TIGR00299 family protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.
 
  
 0.900
KXB65560.1
ABC transporter, ATP-binding protein; KEGG: cle:Clole_1698 1.7e-71 phosphonate-transporting ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.99.
       0.548
KXB65561.1
Hypothetical protein; KEGG: ase:ACPL_7374 0.0060 tpo; Thyroid peroxidase; Psort location: Extracellular, score: 9.64.
       0.516
KXB65562.1
Efflux ABC transporter, permease protein; KEGG: sap:Sulac_3316 7.1e-32 phosphonate-transporting ATPase K05685; Psort location: CytoplasmicMembrane, score: 10.00.
       0.516
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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