STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65594.1Transcriptional regulator, TetR family. (206 aa)    
Predicted Functional Partners:
KXB65595.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.865
KXB65596.1
Hypothetical protein; KEGG: sgg:SGGBAA2069_c07430 2.1e-32 phaB1; alpha/beta fold family hydrolase; Psort location: Cytoplasmic, score: 8.96.
 
    0.795
KXB66252.1
LytTr DNA-binding domain protein; KEGG: ase:ACPL_8280 0.0041 Chemotaxis response regulator protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 9.97.
  
     0.477
KXB65593.1
Hypothetical protein.
  
 
   0.430
KXB67321.1
Efflux ABC transporter, permease protein; KEGG: sgg:SGGBAA2069_c11620 1.3e-122 putative ABC transporter permease K02004; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
 0.403
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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