STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65602.1Putative L-ribulose-5-phosphate 4-epimerase; KEGG: btb:BMB171_C0324 4.7e-51 L-fuculose phosphate aldolase; K01628 L-fuculose-phosphate aldolase; Psort location: Cytoplasmic, score: 9.97. (212 aa)    
Predicted Functional Partners:
KXB65164.1
eIF-2B alpha/beta/delta uncharacterized protein; KEGG: ctc:CTC00945 6.9e-98 mtnA; methylthioribose-1-phosphate isomerase; K08963 methylthioribose-1-phosphate isomerase; Psort location: Cytoplasmic, score: 9.97; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
 
 0.911
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.680
birA
biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.648
KXB65106.1
KEGG: pjd:Pjdr2_3748 2.0e-59 ribulose-phosphate 3-epimerase K01783; Psort location: Cytoplasmic, score: 9.97.
    
 0.637
KXB65045.1
Fructose-1,6-bisphosphate aldolase, class II; KEGG: mta:Moth_2404 3.3e-91 fructose-1,6-bisphosphate aldolase K01624; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.636
KXB65165.1
Phosphorylase family 2; Purine nucleoside phosphorylase involved in purine salvage.
 
 
 0.609
KXB65601.1
DEAD2 domain protein; KEGG: dhd:Dhaf_2947 6.5e-141 DEAD/DEAH box helicase; K10844 DNA excision repair protein ERCC-2; Psort location: Cytoplasmic, score: 9.97.
  
    0.585
KXB65647.1
KEGG: csh:Closa_2452 9.0e-215 homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.580
KXB65603.1
RNA methyltransferase, TrmH family, group 2; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.
       0.579
pgk
KEGG: fma:FMG_0792 1.8e-106 phosphoglycerate kinase; K00927 phosphoglycerate kinase; Psort location: Cytoplasmic, score: 9.97.
     
 0.570
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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