STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65632.1Aminotransferase, class V; KEGG: dhd:Dhaf_3910 2.1e-71 cysteine desulfurase; Psort location: Cytoplasmic, score: 9.97. (368 aa)    
Predicted Functional Partners:
KXB68579.1
SUF system FeS assembly protein, NifU family; KEGG: hbo:Hbor_34450 2.2e-05 cysteine desulfurase; Psort location: Cytoplasmic, score: 8.96.
  
 0.938
KXB65633.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.773
KXB65634.1
Tex-like protein; KEGG: npu:Npun_R5425 1.8e-147 RNA-binding S1 domain-containing protein K06959; Psort location: Cytoplasmic, score: 9.97.
       0.773
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
  
  0.758
KXB67339.1
Selenium metabolism protein YedF; KEGG: drm:Dred_1242 7.1e-25 SirA family protein; K04085 tRNA 2-thiouridine synthesizing protein A; Psort location: Cytoplasmic, score: 8.96; Belongs to the sulfur carrier protein TusA family.
 
 
 
 0.717
KXB68581.1
SufB/sufD domain protein; KEGG: suc:ECTR2_773 1.3e-12 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 8.96.
 
 0.702
KXB68582.1
KEGG: suc:ECTR2_773 4.3e-128 sufB; feS assembly protein SufB K09014; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.684
KXB68583.1
FeS assembly ATPase SufC; KEGG: ppo:PPM_1514 2.9e-67 yurY; phosphate import ATP-binding protein pstB Phosphate-transporting ATPase; ABC phosphate transporter K09013; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.676
KXB65307.1
KEGG: apr:Apre_0764 3.0e-72 thioredoxin reductase; K00384 thioredoxin reductase (NADPH); Psort location: Cytoplasmic, score: 9.97.
 
 
  0.673
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
       0.635
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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