STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65385.14Fe-4S binding domain protein; KEGG: cco:CCC13826_1973 4.0e-14 riboflavin biosynthesis protein ribAB; Psort location: CytoplasmicMembrane, score: 10.00. (296 aa)    
Predicted Functional Partners:
KXB65384.1
Redoxin family protein; KEGG: cby:CLM_0322 7.6e-12 antioxidant, AhpC/TSA family.
 
   
 0.948
KXB65386.1
Hypothetical protein.
       0.806
rnfB
Putative ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.719
KXB66391.1
4Fe-4S binding domain protein; KEGG: pya:PYCH_10970 2.8e-08 Coenzyme F420 hydrogenase subunit gamma; K00443 coenzyme F420 hydrogenase gamma subunit; Psort location: Cytoplasmic, score: 8.96.
  
 
 0.582
KXB65387.1
KEGG: txy:Thexy_1943 0. pyruvate ferredoxin/flavodoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.96.
  
  
 0.512
KXB67074.1
Copper-exporting ATPase; KEGG: tep:TepRe1_2040 3.3e-233 heavy metal translocating P-type ATPase K01533; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.448
KXB66608.1
4Fe-4S binding domain protein; KEGG: ova:OBV_17380 2.0e-18 aldo-keto reductase; Psort location: Cytoplasmic, score: 9.97.
  
 
  0.424
KXB65508.1
Hypothetical protein.
       0.417
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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