STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65098.1Hypothetical protein; KEGG: pmo:Pmob_0749 6.6e-06 ATP synthase F0 subunit B; K02109 F-type H+-transporting ATPase subunit b; Psort location: Cytoplasmic, score: 8.96. (144 aa)    
Predicted Functional Partners:
KXB65100.1
RNA methyltransferase, RsmD family; KEGG: ctc:CTC01232 3.2e-29 methyltransferase; Psort location: Cytoplasmic, score: 8.96.
  
    0.866
coaD
Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
       0.814
KXB65102.1
DAK2 domain fusion protein YloV; KEGG: bmd:BMD_4216 6.3e-120 putative phosphatase K07030; Psort location: Cytoplasmic, score: 8.96.
 
     0.689
recG
Putative ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.674
KXB65103.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.656
KXB65027.1
six-Cys-in-45 modification radical SAM protein; KEGG: mcj:MCON_2732 2.6e-13 anaerobic sulfatase-maturating protein K06871; Psort location: Cytoplasmic, score: 8.96.
  
     0.414
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
     0.411
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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