STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65154.1HAD hydrolase, family IIB; KEGG: crn:CAR_c09900 1.6e-20 hydrolase, haloacid dehalogenase-like family K07024; Psort location: Cytoplasmic, score: 8.96. (279 aa)    
Predicted Functional Partners:
KXB67096.1
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.921
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
 0.849
KXB65153.1
Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.752
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.749
KXB67277.1
HAD hydrolase, family IA, variant 3; KEGG: eel:EUBELI_20367 3.7e-22 thiamine-phosphate pyrophosphorylase; K00788 thiamine-phosphate pyrophosphorylase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.652
KXB65142.1
KEGG: baz:BAMTA208_19905 4.0e-118 pdp; pyrimidine-nucleoside phosphorylase K00756; Psort location: Cytoplasmic, score: 8.96.
    
  0.652
KXB65077.1
KEGG: cbt:CLH_1228 9.0e-57 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the ribF family.
   
 0.644
KXB65155.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.633
KXB65156.1
ABC transporter, ATP-binding protein; KEGG: txy:Thexy_2121 3.4e-32 sulfate ABC transporter ATPase K09687; Psort location: CytoplasmicMembrane, score: 7.88.
       0.631
KXB65143.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
  
 
  0.610
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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