STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65180.1Hypothetical protein; KEGG: say:TPY_3350 2.8e-07 ruvX; Holliday junction resolvase; K07447 putative holliday junction resolvase; Psort location: Cytoplasmic, score: 8.96. (108 aa)    
Predicted Functional Partners:
KXB65178.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.842
KXB65181.1
Xaa-His dipeptidase; KEGG: tde:TDE2228 5.6e-103 aminoacyl-histidine dipeptidase; K01270 dipeptidase D; Psort location: Cytoplasmic, score: 8.96.
 
     0.824
KXB65183.1
RelA/SpoT domain protein; KEGG: bcz:BCZK4091 6.0e-07 GTP diphosphokinase K00951; Psort location: Cytoplasmic, score: 8.96.
 
     0.708
KXB65179.1
Radical SAM protein family; KEGG: fnu:FN1142 5.2e-45 oxygen-independent coproporphyrinogen III oxidase K07139; Psort location: Cytoplasmic, score: 8.96.
       0.653
msrA
Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.631
KXB66607.1
RNAse H domain protein, YqgF family; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
    0.620
KXB66609.1
Hypothetical protein.
  
  
 0.542
KXB65177.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.511
KXB65184.1
Peptidylprolyl isomerase PrsA1 family protein; KEGG: cdc:CD196_1221 1.6e-59 peptidyl-prolyl isomerase; K03769 peptidyl-prolyl cis-trans isomerase C; Psort location: CytoplasmicMembrane, score: 7.88.
       0.499
KXB65015.1
SH3 domain protein; KEGG: bmq:BMQ_1498 2.5e-55 glycosyl hydrolase family 18 protein.
  
     0.480
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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