STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65186.1Hypothetical protein; KEGG: ccl:Clocl_0282 2.0e-14 beta-1,4-xylanase; K01181 endo-1,4-beta-xylanase. (320 aa)    
Predicted Functional Partners:
KXB68417.1
Copper amine oxidase domain protein; KEGG: toc:Toce_1786 4.0e-10 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
 
    0.778
KXB67312.1
Hypothetical protein; KEGG: pjd:Pjdr2_3195 1.1e-18 hyaluronate lyase.
 
    0.778
KXB67152.1
Copper amine oxidase domain protein; KEGG: bbe:BBR47_04720 6.6e-17 cwlU; hypothetical protein; K01448 N-acetylmuramoyl-L-alanine amidase.
 
    0.778
KXB64900.1
Copper amine oxidase domain protein; KEGG: pjd:Pjdr2_2475 3.4e-16 N-acetylmuramoyl-L-alanine amidase K01448.
 
    0.778
KXB65641.1
SCP-like protein; KEGG: nth:Nther_1077 7.9e-10 N-acetylmuramoyl-L-alanine amidase K01448; Psort location: Cytoplasmic, score: 8.96.
 
    0.777
KXB64883.1
Hypothetical protein; KEGG: ova:OBV_26790 2.0e-21 putative 5'-nucleotidase.
  
    0.775
KXB67774.1
Hypothetical protein; KEGG: hhd:HBHAL_4444 1.1e-20 alkaline serine protease, subtilase family; Psort location: Periplasmic, score: 9.83.
  
     0.774
KXB66874.1
Copper amine oxidase domain protein; KEGG: dca:Desca_1893 9.7e-19 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase.
  
     0.773
KXB65284.1
Copper amine oxidase domain protein; KEGG: ppo:PPM_2002 0.00013 ispC; protease inhibitor.
 
    0.771
KXB65287.1
Hypothetical protein; KEGG: cle:Clole_3979 2.6e-13 glucan endo-1,3-beta-D-glucosidase.
  
     0.771
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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