STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65189.1Adenosylcobalamin biosynthesis protein CobU; KEGG: eum:ECUMN_2329 4.6e-37 cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; K02231 adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase; Psort location: Cytoplasmic, score: 9.97. (175 aa)    
Predicted Functional Partners:
cobT
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).
 
 0.998
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
 0.993
cobS
adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
 
 
 0.988
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
 
 0.980
KXB65187.1
Phosphoglycerate mutase family protein; KEGG: clj:CLJU_c35540 3.4e-18 cobC; alpha-ribazole phosphatase K02226; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.910
KXB65193.1
KEGG: aoe:Clos_1021 5.7e-71 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.872
KXB65194.1
CbiG protein; KEGG: cbm:CBF_1007 6.2e-49 cbiG; cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.870
KXB66640.1
KEGG: aoe:Clos_0862 7.7e-83 cobyrinic acid a,c-diamide synthase; K02224 cobyrinic acid a,c-diamide synthase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.867
KXB65195.1
KEGG: aoe:Clos_1019 1.2e-77 precorrin-4 C(11)-methyltransferase K05936; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.830
KXB65200.1
Aminotransferase, class I/II; KEGG: tde:TDE2687 9.3e-39 L-threonine-O-3-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase; Psort location: Cytoplasmic, score: 9.97.
  
 
 0.828
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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